PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast05G280400.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family NAC
Protein Properties Length: 387aa    MW: 42033.1 Da    PI: 4.2168
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast05G280400.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM56.59.4e-18111375128
                 NAM   5 frFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk....kvkaeek.ewyfFskrdkkyatgkrknratksgyWkatgk 88 
                         +rF+ t  e v ++L + ++g++l+ +e  i+++diy ++eP+dL +    + ka+++   +fF+ +++++ + +r+ r++ +g+W  + k
  Brast05G280400.1.p  11 CRFDLTPLEAVAYFLPRLLSGETLHGAERfIHRADIYgNLEPKDLAAafppANKADRTgARFFFTLSKRQKGSRSRSARSAGAGTWTIQ-K 100
                         6999999****************7765555******9456*****8446653334444366*************************965.7 PP

                 NAM  89 dkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                         + +++++ g ++g  k L f ++++   e++ Wvm+eyr 
  Brast05G280400.1.p 101 TIDIYDEAGVKKGEEKKLSFKSKDK---ESSGWVMEEYRC 137
                         79******************84433...469*******95 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100518.8047157IPR003441NAC domain
PfamPF023651.6E-911136IPR003441NAC domain
SuperFamilySSF1019412.48E-1712156IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 387 aa     Download sequence    Send to blast
MELDMEVFAL CRFDLTPLEA VAYFLPRLLS GETLHGAERF IHRADIYGNL EPKDLAAAFP  60
PANKADRTGA RFFFTLSKRQ KGSRSRSARS AGAGTWTIQK TIDIYDEAGV KKGEEKKLSF  120
KSKDKESSGW VMEEYRCLLP EAVVEDGEMV LCKIHLSHSA CSKKARQRSA AHRLSGSQGQ  180
EDQPAPMAAA TAKRPAPVAS HDPPCAKRAR VAAAEADHSQ DMDGFRSSLE DLVAEQDEPA  240
ADGMDGRFSC TMEELLGGAA TDEEQQDATL LPAVEAELQM VDFDFNLDDL PVLDDDALGE  300
IMLSLDDEAP TSLPALDDGD LLSLPAVEAE QLRGVDLPIA SDEGFDFELP TDEELDAMIS  360
HLQENWPVSF APDGDLVRIP GLPAVL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010239527.11e-159PREDICTED: uncharacterized protein LOC104585199
TrEMBLA0A0Q3HVP81e-160A0A0Q3HVP8_BRADI; Uncharacterized protein (Fragment)
STRINGBRADI4G43020.11e-159(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP18322799